# .msa version 002 # pred m observ m off rank dif %dif sd nac hex fuc neuac neugc S good 1579.78 1580.23 0 100 0.0 0.0 0.0 2 5 0 0 0 .10 10 C (Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35518_A) 1590.80 1591.23 0 100 0.0 0.0 0.0 3 3 1 0 0 .10 10 C (GN??Ma3(Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35288_A) 1661.84 1662.28 0 100 0.0 0.0 0.0 4 3 0 0 0 .10 10 C (GN??Ma3(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35551_A) 1783.88 1784.29 0 100 0.0 0.0 0.0 2 6 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35521_A) 1835.92 1836.31 0 100 0.0 0.0 0.0 4 3 1 0 0 .10 10 C (GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35426_A) 1865.94 1866.26 0 100 0.0 0.0 0.0 4 4 0 0 0 .10 10 C (A??GN??Ma3(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35552_A) 1906.96 1907.32 0 100 0.0 0.0 0.0 5 3 0 0 0 .10 10 C (GNb4(GN??Ma3)(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35547_A) 1987.98 1988.33 0 100 0.0 0.0 0.0 2 7 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN,M) (0) (carbNlink_35062_A) 2040.02 2040.36 0 100 0.0 0.0 0.0 4 4 1 0 0 .10 10 C (A??GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35428_A) 2070.03 2070.34 0 100 0.0 0.0 0.0 4 5 0 0 0 .10 10 C (A??GN??Ma3(A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35563_A) 2081.05 2081.36 0 100 0.0 0.0 0.0 5 3 1 0 0 .10 10 C (GNb4(GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35418_A) 2192.08 2192.36 0 100 0.0 0.0 0.0 2 8 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN,M,M) (0) (carbNlink_35061_A) 2214.11 2214.38 0 100 0.0 0.0 0.0 4 4 2 0 0 .10 10 C (A??(Fa3)GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35427_A) 2244.12 2244.39 0 100 0.0 0.0 0.0 4 5 1 0 0 .10 10 C (A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35470_A) 2285.15 2285.41 0 100 0.0 0.0 0.0 5 4 1 0 0 .10 10 C (GNb4(A??GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35422_A) 2396.18 2396.40 0 100 0.0 0.0 0.0 2 9 0 0 0 .10 10 C (Ma2Ma2Ma3(Ma2Ma3(Ma2Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35527_A) 2401.20 2401.41 0 100 0.0 0.0 0.0 4 4 1 1 0 .10 10 C (NN??A??GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35430_A) 2418.21 2418.41 0 100 0.0 0.0 0.0 4 5 2 0 0 .10 10 C (A??(Fa3)GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35468_A) 2459.24 2459.43 0 100 0.0 0.0 0.0 5 4 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35419_A) 2489.25 2489.41 0 100 0.0 0.0 0.0 5 5 1 0 0 .10 10 C (GNb4(A??GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35456_A) 2530.28 2530.43 0 100 0.0 0.0 0.0 6 4 1 0 0 .10 10 C (GNb4(A??GN??(GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35410_A) 2592.30 2592.44 0 100 0.0 0.0 0.0 4 5 3 0 0 .10 10 C (A??(Fa3)GN??Ma3(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35442_A) 2605.30 2605.46 0 100 0.0 0.0 0.0 4 5 1 1 0 .10 10 C (NN??A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35474_A) 2622.31 2622.43 0 100 0.0 0.0 0.0 4 6 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(Ma3(Ma6)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35291_A) 2646.32 2646.46 0 100 0.0 0.0 0.0 5 4 1 1 0 .10 10 C (GNb4(NN??A??GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35423_A) 2663.34 2663.45 0 100 0.0 0.0 0.0 5 5 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35454_A) 2704.37 2704.47 0 100 0.0 0.0 0.0 6 4 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??(GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35409_A) 2779.39 2779.48 0 100 0.0 0.0 0.0 4 5 2 1 0 .10 10 C (NN??A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35058_A) 2809.40 2809.48 0 100 0.0 0.0 0.0 4 6 1 1 0 .10 10 C (GNb4(NN??A??GN??Ma3)(Ma3(Ma6)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35293_A) 2820.41 2820.49 0 100 0.0 0.0 0.0 5 4 2 1 0 .10 10 C (GNb4(NN??A??GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35052_A) 2839.41 2839.48 0 100 0.0 0.0 0.0 4 7 0 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35520_A) 2850.42 2850.47 0 100 0.0 0.0 0.0 5 5 1 1 0 .10 10 C (GNb4(NN??A??GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35457_A) 2891.45 2891.49 0 100 0.0 0.0 0.0 6 4 1 1 0 .10 10 C (GNb4(NN??A??GN??(GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35411_A) 2966.47 2966.50 0 100 0.0 0.0 0.0 4 5 1 2 0 .10 10 C (NN??A??GN??Ma3(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35513_A) 3024.51 3024.51 0 100 0.0 0.0 0.0 5 5 2 1 0 .10 10 C (GNb4(NN??A??GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35055_A) 3054.52 3054.49 0 100 0.0 0.0 0.0 5 6 1 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35463_A) 3082.55 3082.52 0 100 0.0 0.0 0.0 6 5 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35412_A) 3198.60 3198.47 0 100 0.0 0.0 0.0 5 5 3 1 0 .10 10 C (NN??A??(Fa3)GN??(A??(Fa3)GN??)Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35425_A) 3211.60 3211.51 0 100 0.0 0.0 0.0 5 5 1 2 0 .10 10 C (GNb4(NN??A??GN??Ma3)(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35505_A) 3228.61 3228.77 0 100 0.0 0.0 0.0 5 6 2 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35056_A) 3269.64 3269.53 0 100 0.0 0.0 0.0 6 5 2 1 0 .10 10 C (GNb4(NN??A??GN??(A??GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35051_A) 3286.65 3286.55 0 100 0.0 0.0 0.0 6 6 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35449_A) 3329.66 3329.50 0 100 0.0 0.0 0.0 6 7 0 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4GN) (0) (carbNlink_35534_A) 3385.69 3385.55 0 100 0.0 0.0 0.0 5 5 2 2 0 .10 10 C (GNb4(NN??A??(Fa3)GN??Ma3)(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35504_A) 3402.70 3402.52 0 100 0.0 0.0 0.0 5 6 3 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35039_A) 3415.70 3415.55 0 100 0.0 0.0 0.0 5 6 1 2 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35467_A) 3456.72 3456.62 0 100 0.0 0.0 0.0 6 5 1 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35417_A) 3514.77 3514.51 0 100 0.0 0.0 0.0 7 5 2 1 0 .10 10 C (GNb4(NN??A??GN??(A??GN??)Ma3)(GN??(GN??)Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35042_A) 3589.79 3589.54 0 100 0.0 0.0 0.0 5 6 2 2 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35057_A) 3630.81 3630.59 0 100 0.0 0.0 0.0 6 5 2 2 0 .10 10 C (GNb4(NN??A??(Fa3)GN??(NN??A??GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35416_A) 3647.83 3647.54 0 100 0.0 0.0 0.0 6 6 3 1 0 .10 10 C (GNb4(NN??A??GN??(A??GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35037_A) 3660.82 3660.67 0 100 0.0 0.0 0.0 6 6 1 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35453_A) 3690.83 3690.54 0 100 0.0 0.0 0.0 6 7 0 2 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4GN) (0) (carbNlink_35535_A) 3701.85 3701.48 0 100 0.0 0.0 0.0 7 5 1 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(GN??(GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35305_A) 3776.87 3776.47 0 100 0.0 0.0 0.0 5 6 1 3 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35510_A) 3834.91 3834.56 0 100 0.0 0.0 0.0 6 6 2 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35054_A) 3851.93 3851.70 0 100 0.0 0.0 0.0 6 7 3 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35032_A) 3892.95 3892.82 0 100 0.0 0.0 0.0 7 6 3 1 0 .10 10 C (GNb4(NN??A??GN??(A??GN??)Ma3)(A??GN??(GN??)Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35031_A) 3950.96 3950.60 0 100 0.0 0.0 0.0 5 6 2 3 0 .10 10 C (NN??A??(Fa3)GN??(NN??A??GN??)Ma3(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35508_A) 4009.00 4009.44 0 100 0.0 0.0 0.0 6 6 3 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35038_A) 4022.00 4021.91 0 100 0.0 0.0 0.0 6 6 1 3 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35502_A) 4080.04 4079.99 0 100 0.0 0.0 0.0 7 6 2 2 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(A??GN??(GN??)Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35043_A) 4140.06 4140.42 0 100 0.0 0.0 0.0 7 8 0 2 0 .10 10 C (A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4GN,NN,NN,A??GN) (0) (carbNlink_35024_A) 4196.09 4196.46 0 100 0.0 0.0 0.0 6 6 2 3 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35255_A) 4213.10 4213.52 0 100 0.0 0.0 0.0 6 7 3 2 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35033_A) 4267.12 4266.69 0 100 0.0 0.0 0.0 7 6 1 3 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(NN??A??GN??(GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35315_A) 4400.19 4400.47 0 100 0.0 0.0 0.0 6 7 2 3 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(NN??A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35047_A) 4574.27 4574.55 0 100 0.0 0.0 0.0 6 7 3 3 0 .10 10 C (NN??A??GN??(NN??A??GN??)Ma3(NN??A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,F,F) (0) (carbNlink_35035_A) 4589.29 4589.58 0 100 0.0 0.0 0.0 8 9 0 2 0 .10 10 C (A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4GN,NN,NN,A??GN,A??GN) (0) (carbNlink_35014_A) 4645.31 4645.03 0 100 0.0 0.0 0.0 7 7 2 3 0 .10 10 C (GNb4(NN??A??GN??(NN??A??GN??)Ma3)(NN??A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,F) (0) (carbNlink_35046_A) 4761.36 4761.43 0 100 0.0 0.0 0.0 6 7 2 4 0 .10 10 C (NN??A??(Fa3)GN??(NN??A??GN??)Ma3(NN??A??GN??(NN??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35403_A) 4836.42 4836.55 0 100 0.0 0.0 0.0 7 8 4 2 0 .10 10 C (A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN,NN,NN,F,F,F,A??GN) (0) (carbNlink_35018_A) 4950.46 4950.88 0 100 0.0 0.0 0.0 8 9 0 3 0 .10 10 C (A??GN??(A??GN??)Ma3(A??GN??(A??GN??)Ma6)Mb4GNb4GN,NN,NN,NN,A??GN,A??GN) (0) (carbNlink_35016_A)