# .msa version 002 # pred m observ m off rank dif %dif sd nac hex fuc neuac neugc S good 1579.78 1579.61 0 100 0.0 0.0 0.0 2 5 0 0 0 .10 10 C (Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35518_A) 1590.80 1590.62 0 100 0.0 0.0 0.0 3 3 1 0 0 .10 10 C (GN??Ma3(Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35288_A) 1620.81 1620.65 0 100 0.0 0.0 0.0 3 4 0 0 0 .10 10 C (GN??Ma3(Ma3Ma6)Mb4GNb4GN) (0) (carbNlink_35542_A) 1661.84 1661.68 0 100 0.0 0.0 0.0 4 3 0 0 0 .10 10 C (GN??Ma3(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35551_A) 1753.87 1753.74 0 100 0.0 0.0 0.0 2 5 1 0 0 .10 10 C (Ma3(Ma3(Ma6)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35294_A) 1783.88 1783.77 0 100 0.0 0.0 0.0 2 6 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35521_A) 1835.92 1835.82 0 100 0.0 0.0 0.0 4 3 1 0 0 .10 10 C (GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35426_A) 1865.94 1865.85 0 100 0.0 0.0 0.0 4 4 0 0 0 .10 10 C (A??GN??Ma3(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35552_A) 1906.96 1906.89 0 100 0.0 0.0 0.0 5 3 0 0 0 .10 10 C (GN??(GN??)Ma3(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35550_A) 1987.98 1987.93 0 100 0.0 0.0 0.0 2 7 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN,M) (0) (carbNlink_35062_A) 2040.02 2039.99 0 100 0.0 0.0 0.0 4 4 1 0 0 .10 10 C (A??GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35428_A) 2070.03 2070.01 0 100 0.0 0.0 0.0 4 5 0 0 0 .10 10 C (A??GN??Ma3(A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35563_A) 2081.05 2081.02 0 100 0.0 0.0 0.0 5 3 1 0 0 .10 10 C (GN??(GN??)Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35424_A) 2111.06 2111.04 0 100 0.0 0.0 0.0 5 4 0 0 0 .10 10 C (GNb4(A??GN??Ma3)(GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35548_A) 2192.08 2192.09 0 100 0.0 0.0 0.0 2 8 0 0 0 .10 10 C (Ma2Ma3(Ma3(Ma6)Ma6)Mb4GNb4GN,M,M) (0) (carbNlink_35061_A) 2203.10 2203.11 0 100 0.0 0.0 0.0 3 6 1 0 0 .10 10 C (A??GN??Ma3(Ma3(Ma6)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35297_A) 2214.11 2214.12 0 100 0.0 0.0 0.0 4 4 2 0 0 .10 10 C (A??(Fa3)GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35427_A) 2244.12 2244.14 0 100 0.0 0.0 0.0 4 5 1 0 0 .10 10 C (A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35470_A) 2315.16 2315.23 0 100 0.0 0.0 0.0 5 5 0 0 0 .10 10 C (GNb4(A??GN??Ma3)(A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35557_A) 2396.18 2396.24 0 100 0.0 0.0 0.0 2 9 0 0 0 .10 10 C (Ma2Ma2Ma3(Ma2Ma3(Ma2Ma6)Ma6)Mb4GNb4GN) (0) (carbNlink_35527_A) 2418.21 2418.28 0 100 0.0 0.0 0.0 4 5 2 0 0 .10 10 C (A??(Fa3)GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35468_A) 2431.21 2431.29 0 100 0.0 0.0 0.0 4 4 1 0 1 .10 10 C (NJ??A??GN??Ma3(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35429_A) 2431.21 2431.29 0 100 0.0 0.0 0.0 4 5 0 1 0 .10 10 C (NN??A??GN??Ma3(A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35566_A) 2448.22 2448.29 0 100 0.0 0.0 0.0 4 6 1 0 0 .10 10 C (A??A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35472_A) 2459.24 2459.32 0 100 0.0 0.0 0.0 5 4 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35419_A) 2478.23 2478.29 0 100 0.0 0.0 0.0 4 7 0 0 0 .10 10 C (A??A??GN??Ma3(A??A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35569_A) 2489.25 2489.33 0 100 0.0 0.0 0.0 5 5 1 0 0 .10 10 C (GNb4(A??GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35456_A) 2592.30 2592.40 0 100 0.0 0.0 0.0 4 5 3 0 0 .10 10 C (A??(Fa3)GN??Ma3(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35442_A) 2605.30 2605.41 0 100 0.0 0.0 0.0 4 5 1 1 0 .10 10 C (NN??A??GN??Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35474_A) 2633.33 2633.44 0 100 0.0 0.0 0.0 5 4 3 0 0 .10 10 C (GNb4((Fa3)A??(Fa3)GN??Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35420_A) 2663.34 2663.46 0 100 0.0 0.0 0.0 5 5 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35454_A) 2779.39 2779.53 0 100 0.0 0.0 0.0 4 5 2 1 0 .10 10 C (NN??A??GN??Ma3(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35445_A) 2809.40 2809.57 0 100 0.0 0.0 0.0 4 5 2 0 1 .10 10 C (A??(Fa3)GN??Ma3(NJ??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35497_A) 2809.40 2809.57 0 100 0.0 0.0 0.0 4 6 1 1 0 .10 10 C (NN??A??GN??Ma3(A??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35491_A) 2822.39 2822.57 0 100 0.0 0.0 0.0 4 5 0 1 1 .10 10 C (NN??A??GN??Ma3(NJ??A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35574_A) 2837.43 2837.60 0 100 0.0 0.0 0.0 5 5 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35435_A) 2852.40 2852.58 0 100 0.0 0.0 0.0 4 5 0 0 2 .10 10 C (NJ??A??GN??Ma3(NJ??A??GN??Ma6)Mb4GNb4GN) (0) (carbNlink_35573_A) 2867.44 2867.59 0 100 0.0 0.0 0.0 5 6 2 0 0 .10 10 C (A??(Fa3)GN??(A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35460_A) 2908.47 2908.66 0 100 0.0 0.0 0.0 6 5 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35414_A) 2966.47 2966.68 0 100 0.0 0.0 0.0 4 5 1 2 0 .10 10 C (NN??A??GN??Ma3(NN??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35513_A) 2996.48 2996.69 0 100 0.0 0.0 0.0 4 5 1 1 1 .10 10 C (NN??A??GN??Ma3(NJ??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35499_A) 3026.49 3026.72 0 100 0.0 0.0 0.0 4 5 1 0 2 .10 10 C (NJ??A??GN??Ma3(NJ??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35498_A) 3041.53 3041.76 0 100 0.0 0.0 0.0 5 6 3 0 0 .10 10 C (A??(Fa3)GN??(A??GN??)Ma3(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35439_A) 3054.52 3054.73 0 100 0.0 0.0 0.0 5 6 1 1 0 .10 10 C (NN??A??GN??(A??GN??)Ma3(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35463_A) 3054.52 3054.73 0 100 0.0 0.0 0.0 5 5 2 0 1 .10 10 C (GNb4(A??(Fa3)GN??Ma3)(NJ??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35492_A) 3082.55 3082.81 0 100 0.0 0.0 0.0 6 5 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35412_A) 3112.57 3112.81 0 100 0.0 0.0 0.0 6 6 2 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??GN??)Ma3)(A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35450_A) 3215.62 3215.89 0 100 0.0 0.0 0.0 5 6 4 0 0 .10 10 C (A??(Fa3)GN??(A??(Fa3)GN??)Ma3(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35437_A) 3286.65 3286.94 0 100 0.0 0.0 0.0 6 6 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??GN??)Ma3)(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35434_A) 3357.69 3357.99 0 100 0.0 0.0 0.0 7 6 2 0 0 .10 10 C (GNb4(GN??(A??GN??)Ma3)(A??GN??(A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35332_A) 3417.71 3418.00 0 100 0.0 0.0 0.0 7 8 0 0 0 .10 10 C (GNb4(A??GN??(A??GN??)Ma3)(A??GN??(A??A??GN??)Ma6)Mb4GNb4GN) (0) (carbNlink_35538_A) 3460.74 3461.07 0 100 0.0 0.0 0.0 6 6 4 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35432_A) 3490.75 3491.06 0 100 0.0 0.0 0.0 6 7 3 0 0 .10 10 C (A??(Fa3)GN??(A??GN??)Ma3(A??GN??(A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35335_A) 3531.78 3532.13 0 100 0.0 0.0 0.0 7 6 3 0 0 .10 10 C (GNb4(A??(Fa3)GN??(GN??)Ma3)(A??GN??(A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35330_A) 3664.84 3665.19 0 100 0.0 0.0 0.0 6 7 4 0 0 .10 10 C (A??(Fa3)GN??(A??(Fa3)GN??)Ma3(A??GN??(A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35334_A) 3679.82 3680.18 0 100 0.0 0.0 0.0 5 7 1 0 2 .10 10 C (NJ??A??GN??(NJ??A??GN??)Ma3(A??A??GN??Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35484_A) 3705.87 3706.22 0 100 0.0 0.0 0.0 7 6 4 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??GN??((Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35599_A) 3909.97 3910.39 0 100 0.0 0.0 0.0 7 7 4 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??(A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35349_A) 3954.95 3955.27 0 100 0.0 0.0 0.0 6 8 0 0 2 .10 10 C (A??A??GN??(A??GN??)Ma3(NJ??A??GN??(NJ??A??GN??)Ma6)Mb4GNb4GN) (0) (carbNlink_35539_A) 4084.06 4084.51 0 100 0.0 0.0 0.0 7 7 5 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??(A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35326_A) 4127.06 4127.43 0 100 0.0 0.0 0.0 7 8 2 1 0 .10 10 C (GNb4(A??GN??(A??(Fa3)GN??)Ma3)(NN??A??GN??(A??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35606_A) 4301.15 4301.40 0 100 0.0 0.0 0.0 7 8 3 1 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(NN??A??GN??(A??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35379_A) 4359.20 4359.88 0 100 0.0 0.0 0.0 8 8 4 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??(A??GN??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35598_A) 4518.25 4518.60 0 100 0.0 0.0 0.0 7 7 3 0 2 .10 10 C (GNb4(NJ??A??GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??(NJ??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35380_A) 4518.25 4518.60 0 100 0.0 0.0 0.0 7 8 2 1 1 .10 10 C (GNb4(NJ??A??GN??(A??A??GN??)Ma3)(A??(Fa3)GN??(NN??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35399_A) 4518.25 4518.60 0 100 0.0 0.0 0.0 7 9 1 2 0 .10 10 C (GNb4(NN??A??GN??(A??A??GN??)Ma3)(A??A??GN??(NN??A??GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35400_A) 4533.28 4533.72 0 100 0.0 0.0 0.0 8 8 5 0 0 .10 10 C (GNb4(A??(Fa3)GN??(A??(Fa3)GN??)Ma3)(A??(Fa3)GN??(A??GN??A??(Fa3)GN??)Ma6)Mb4GNb4(Fa6)GN) (0) (carbNlink_35346_A)